Electron Microscopy Data Bank

EMPIAR-11260

Release date: Jan. 18, 2023
Dataset size: 348.5 GB
Experiment type: EMDB

Peng R, Fu X, Mendez JH, Randolph PS, Bammes BE, Stagg SM

J Struct Biol X (2022) 7 [ DOI: 10.1016/j.yjsbx.2022.100080 Pubmed: 36578473 ]

Image sets:

Unaligned frames of apoferritin from DE Apollo with 30 eps dose rate

EMPIAR-11261

Release date: Jan. 17, 2023
Dataset size: 154.5 GB
Experiment type: EMDB

Peng R, Fu X, Mendez JH, Randolph PS, Bammes BE, Stagg SM

J Struct Biol X (2022) 7 [ DOI: 10.1016/j.yjsbx.2022.100080 Pubmed: 36578473 ]

Image sets:

Unaligned frames of apoferritin from DE Apollo with 60 eps dose rate

EMPIAR-11254

Release date: Jan. 3, 2023
Dataset size: 297.2 GB
Experiment type: EMDB

Peng R, Fu X, Mendez JH, Randolph PS, Bammes BE, Stagg SM

J Struct Biol X (2022) 7 [ DOI: 10.1016/j.yjsbx.2022.100080 Pubmed: 36578473 ]

Image sets:

Unaligned frames of apoferritin from DE Apollo with 15eps dose rate

EMD-28259

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Mouse apoferritin heavy chain with zinc determined using single-particle cryo-EM with Apollo camera.

Release date: Dec. 21, 2022
Resolution: 1.66 Å
EM Method: Single-particle
Fitted PDBs: 8emq
Q-score: 0.857

Peng R, Fu X, Mendez JH, Randolph PS, Bammes BE, Stagg SM

J Struct Biol X (2023) 7 pp. 100080-100080 [ Pubmed: 36578473 DOI: doi:10.1016/j.yjsbx.2022.100080 ]

Sample:

Mouse apoferritin heavy chain (506 kDa, Complex from Mus musculus)
Ferritin heavy chain, n-terminally processed (20 kDa, Protein from Mus musculus)
Zinc ion (65 Da, Ligand)
Fe (iii) ion (55 Da, Ligand)
Water (18 Da, Ligand)

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EMD-28269

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Mouse apoferritin heavy chain without zinc determined using single-particle cryo-EM with Apollo camera.

Release date: Dec. 21, 2022
Resolution: 1.68 Å
EM Method: Single-particle
Fitted PDBs: 8en7
Q-score: 0.839

Peng R, Fu X, Mendez JH, Randolph PS, Bammes BE, Stagg SM

J Struct Biol X (2023) 7 pp. 100080-100080 [ Pubmed: 36578473 DOI: doi:10.1016/j.yjsbx.2022.100080 ]

Sample:

Ferritin heavy chain, n-terminally processed (20 kDa, Protein from Mus musculus)
Mouse apoferritin heavy chain (506 kDa, Complex from Mus musculus)
Water (18 Da, Ligand)
Fe (iii) ion (55 Da, Ligand)

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EMD-20155

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Apoferritin from equine spleen at 2.9 Angstrom

Release date: Nov. 27, 2019
Resolution: 2.9 Å
EM Method: Single-particle

Mendez JH, Mehrani A, Randolph P, Stagg S

IUCrJ (2019) 6 pp. 1007-1013 [ DOI: doi:10.1107/S2052252519012661 Pubmed: 31709056 ]

Sample:

Apoferritin from equine spleen. (480 kDa, Complex from Equus caballus)

EMD-20156

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Apoferritin from equine spleen at 3.9 Angstrom

Release date: Nov. 27, 2019
Resolution: 3.9 Å
EM Method: Single-particle

Mendez JH, Mehrani A, Randolph P, Stagg S

IUCrJ (2019) 6 pp. 1007-1013 [ DOI: doi:10.1107/S2052252519012661 Pubmed: 31709056 ]

Sample:

Apoferritin from equine spleen. (481 kDa, Complex from Equus caballus)

EMD-20157

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Apoferritin from equine spleen at 4.3 Angstrom

Release date: Nov. 27, 2019
Resolution: 4.3 Å
EM Method: Single-particle

Mendez JH, Mehrani A, Randolph P, Stagg S

IUCrJ (2019) 6 pp. 1007-1013 [ DOI: doi:10.1107/S2052252519012661 Pubmed: 31709056 ]

Sample:

Apoferritin from equine spleen. (481 kDa, Complex from Equus caballus)

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